Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: PDE 225
Gene Information
Gene Symbol
PDE 225
Chromosome Locus
At5g24314
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Unknown
Function Details
None
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
1500 nucleotides
mRNA:
636 nucleotides
Protein:
161 amino acids
cDNA Status
FLcDNA Available:
AK220647
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (87%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
Mutant Information
Allele Symbol
pde 225
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
19390
Ecotype
Uncertain
Genetic Background
ABRC Stock
CS16063
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
30.7 %
Chi - Square
19.7
Seeds Counted
1158
Percent Top Half
52.1 %
Chi - Square
0.6
Average Seed Length
Average Embryo Length