SeedGenes Profile: PDE 277

Gene Information Gene Symbol PDE 277 Chromosome Locus At2g26930   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol ISPE (TAIR) Alternate Name Gene Class Seed Pigment Predicted Function Isoprenoid Biosynthesis in Plastids Function Details Enzyme in deoxyxylulose phosphate pathway of terpenoid biosynthesis Gene Evidence Border Recovery Chen / Salk (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Database Release September, 2002 Predicted Sequences Gene: 2560 nucleotides mRNA: 1311 nucleotides Protein:   383 amino acids cDNA Status FLcDNA Available: AY136394 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (89%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 266863_at

Mutant Information Allele Symbol ispE-1 Mutant Class Seed Pigment Source of Mutant Chen / Salk Mutant Line Number SALK_107310 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 2 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length