Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: PDE 312
Gene Information
Gene Symbol
PDE 312
Chromosome Locus
At3g48500
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Uncertain
Function Details
Putative role in plastid gene expression (pTAC10)
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release
September, 2002
Predicted Sequences
Gene:
3451 nucleotides
mRNA:
2345 nucleotides
Protein:
697 amino acids
cDNA Status
FLcDNA Available:
AK229521
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Tomato (Lycopersicon esculentum) (69%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
252362_at
Mutant Information
Allele Symbol
pde 312-2
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
94990
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16140
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 2
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
September, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
25.5 %
Chi - Square
0.2
Seeds Counted
1164
Percent Top Half
50.8 %
Chi - Square
<0.1
Average Seed Length
Average Embryo Length