OSU Syngenta vbi

SeedGenes Profile: PDE 312

Gene Information
Gene Symbol PDE 312
Chromosome Locus At3g48500   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function Uncertain
Function Details Putative role in plastid gene expression (pTAC10)
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release September, 2002
Predicted Sequences
Gene:3451 nucleotides
mRNA: 2345 nucleotides
Protein:  697 amino acids
cDNA Status FLcDNA Available: AK229521
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Tomato (Lycopersicon esculentum) (69%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 252362_at
Mutant Information
Allele Symbol pde 312-2
Mutant Class Seed Pigment
Source of Mutant Meinke / Syngenta
Mutant Line Number 94990
Ecotype Columbia
Genetic Background  
ABRC Stock CS16140
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 2
Terminal Phenotype Pigment Defective
Nomarski Phenotype  
Allelism Evidence Complementation Test; Sequence Identity
Database Release September, 2002
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 25.5 %
Chi - Square 0.2
Seeds Counted 1164
Percent Top Half 50.8 %
Chi - Square <0.1
Average Seed Length  
Average Embryo Length