SeedGenes Profile: PDE 319

Gene Information Gene Symbol PDE 319 Chromosome Locus At2g24120   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol SCA 3 (J. Micol) Sequence Identity Gene Class Seed Pigment Predicted Function Chloroplast DNA-Dependent RNA Polymerase Function Details Transcription of chloroplast genes Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Border Recovery Micol / Salk (2 alleles) Database Release September, 2003 Predicted Sequences Gene: 5727 nucleotides mRNA: 3536 nucleotides Protein:   993 amino acids cDNA Status FLcDNA Available: AK229652 Top BLAST Hits Arabidopsis: AT1G68990.1 (59%) Plant ESTs: Nicotiana tabacum (71%) Model Genomes:   Saccharomyces cerevisiae (38%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 265991_at

Mutant Information Allele Symbol sca 3-2 Mutant Class Seed Pigment Source of Mutant Micol / Salk Mutant Line Number SALK_093884 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 3 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length