SeedGenes Profile: PDE 319

Gene Information Gene Symbol PDE 319 Chromosome Locus At2g24120   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol SCA 3 (J. Micol) Sequence Identity Gene Class Seed Pigment Predicted Function Chloroplast DNA-Dependent RNA Polymerase Function Details Transcription of chloroplast genes Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Border Recovery Micol / Salk (2 alleles) Database Release September, 2003 Predicted Sequences Gene: 5727 nucleotides mRNA: 3536 nucleotides Protein:   993 amino acids cDNA Status FLcDNA Available: AK229652 Top BLAST Hits Arabidopsis: AT1G68990.1 (59%) Plant ESTs: Nicotiana tabacum (71%) Model Genomes:   Saccharomyces cerevisiae (38%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 265991_at

Mutant Information Allele Symbol sca 3-3 Mutant Class Seed Pigment Source of Mutant Micol / Salk Mutant Line Number SALK_067191 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 18 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length