Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: PDE 320
Gene Information
Gene Symbol
PDE 320
Chromosome Locus
At3g06960
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
TGD 4
(C. Benning) Alternate Name
Gene Class
Seed Pigment
Predicted Function
Uncertain
Function Details
Lipid transport between ER and plastid
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2003
Predicted Sequences
Gene:
2340 nucleotides
mRNA:
1654 nucleotides
Protein:
479 amino acids
cDNA Status
FLcDNA Available:
AF367275
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Vitis vinifera (57%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
258553_at
Mutant Information
Allele Symbol
pde 320
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
117405
Ecotype
Columbia
Genetic Background
qrt
ABRC Stock
CS16230
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1 to Intron 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
September, 2003
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
24.4 %
Chi - Square
0.2
Seeds Counted
1102
Percent Top Half
42.0 %
Chi - Square
6.9
Average Seed Length
Average Embryo Length