OSU Syngenta vbi

SeedGenes Profile: PDE 324

Gene Information
Gene Symbol PDE 324
Chromosome Locus At3g04260   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function SAP Domain Protein (PTAC3)
Function Details Plastid gene expression
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:4493 nucleotides
mRNA: 2950 nucleotides
Protein:  913 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (88%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 258573_at
Mutant Information
Allele Symbol pde 324-1
Mutant Class Seed Pigment
Source of Mutant Meinke / Salk
Mutant Line Number SALK_108852
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Intron 10
Terminal Phenotype Pigment Defective  Details
Nomarski Phenotype  
Allelism Evidence Reference Allele
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 25.8 %
Chi - Square 0.1
Seeds Counted 326
Percent Top Half 54.8 %
Chi - Square 0.8
Average Seed Length 550 ± 0 µm
Average Embryo Length 500 ± 0 µm