OSU Syngenta vbi

SeedGenes Profile: PDE 324

Gene Information
Gene Symbol PDE 324
Chromosome Locus At3g04260   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function SAP Domain Protein (PTAC3)
Function Details Plastid gene expression
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:4493 nucleotides
mRNA: 2950 nucleotides
Protein:  913 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (88%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 258573_at
Mutant Information
Allele Symbol pde 324-2
Mutant Class Seed Pigment
Source of Mutant Meinke / Salk
Mutant Line Number SALK_110045
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 2
Terminal Phenotype Pigment Defective  Details
Nomarski Phenotype  
Allelism Evidence Complementation Test; Sequence Identity
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 22.4 %
Chi - Square 1.1
Seeds Counted 295
Percent Top Half 53.0 %
Chi - Square 0.2
Average Seed Length 550 ± 10 µm
Average Embryo Length 500 ± 10 µm