Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: PDE 327
Gene Information
Gene Symbol
PDE 327
Chromosome Locus
At4g30720
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Unknown
Function Details
None
Gene Evidence
Border Recovery
Myouga / Salk (1 allele)
Border Recovery
Myouga / SAIL (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
3614 nucleotides
mRNA:
2488 nucleotides
Protein:
707 amino acids
cDNA Status
FLcDNA Available:
AK226777
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Rice (Oryza sativa) (67%)
Model Genomes:
Synechocystis (42%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
253585_at
Mutant Information
Allele Symbol
pde 327-2
Mutant Class
Seed Pigment
Source of Mutant
Myouga / Riken
Mutant Line Number
SAIL_20_E03
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 3
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Sequence Identity
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
19.8 %
Chi - Square
3.7
Seeds Counted
243
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length