SeedGenes Profile: PDE 343

Gene Information Gene Symbol PDE 343 Chromosome Locus At1g74850   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function PPR; TPR Domain Protein Function Details Processing of chloroplast mRNAs Gene Evidence Border Recovery Myouga / Salk (1 allele) Border Recovery Oelmuller / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 3466 nucleotides mRNA: 2977 nucleotides Protein:   862 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT5G02860.1 (26%) Plant ESTs: Rice (Oryza sativa) (54%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 262207_at

Mutant Information Allele Symbol pde 343 Mutant Class Seed Pigment Source of Mutant Myouga / Salk Mutant Line Number SALK_027899 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 1 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds 26.8 % Chi - Square 1.0 Seeds Counted 650 Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length