SeedGenes Profile: PDE 343

Gene Information Gene Symbol PDE 343 Chromosome Locus At1g74850   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function PPR; TPR Domain Protein Function Details Processing of chloroplast mRNAs Gene Evidence Border Recovery Myouga / Salk (1 allele) Border Recovery Oelmuller / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 3466 nucleotides mRNA: 2977 nucleotides Protein:   862 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT5G02860.1 (26%) Plant ESTs: Rice (Oryza sativa) (54%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 262207_at

Mutant Information Allele Symbol pde 343 ptac 2 Mutant Class Seed Pigment Seed Pigment Source of Mutant Myouga / Salk Oelmuller / Salk Mutant Line Number SALK_027899 SALK_075736 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 1 Exon 3 Terminal Phenotype Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release December, 2010 December, 2010 Seed Color     Embryo Color     Percent Mutant Seeds 26.8 %   Chi - Square 1.0   Seeds Counted 650   Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length