Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: SMT 1
Gene Information
Gene Symbol
SMT 1
Chromosome Locus
At5g13710
Alleles in Database
4
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
CPH
(G. Jurgens) Sequence Identity
Gene Class
Embryo Defective
Predicted Function
Sterol Methyltransferase (Yeast Erg6p)
Function Details
Sterol biosynthesis; modulation of cholesterol levels
Gene Evidence
Sequenced Mutant Allele
G. Jurgens (1 allele)
Double Border Recovery
G. Fink (2 alleles)
Phenotypic Reversion
G. Fink (1 allele)
Sequenced Mutant Allele
G. Fink (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
3364 nucleotides
mRNA:
1473 nucleotides
Protein:
336 amino acids
cDNA Status
FLcDNA Available:
AF195648
Top BLAST Hits
Arabidopsis
:
AT1G76090.1 (41%)
Plant ESTs:
Brassica napus (95%)
Model Genomes:
Saccharomyces cerevisiae (53%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
250254_at
Mutant Information
Allele Symbol
smt 1-3
Mutant Class
Embryo Defective
Source of Mutant
G. Fink
Mutant Line Number
Ecotype
Wassilewskija
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
No
Flanking Sequence
Location of Mutation
Exon 10
Terminal Phenotype
Cotyledon
Nomarski Phenotype
Allelism Evidence
Sequence Identity
Database Release
September, 2002
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length