OSU Syngenta vbi

SeedGenes Profile: SSE

Gene Information
Gene Symbol SSE
Chromosome Locus At2g45690   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Peroxisomal Biogenesis Factor (Pex16)
Function Details Required for protein and oil body biogenesis
Gene Evidence
Molecular Complementation
H. Goodman (1 allele)
Border Recovery
H. Goodman (1 allele)
Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:2565 nucleotides
mRNA: 1532 nucleotides
Protein:  367 amino acids
cDNA Status FLcDNA Available: AK175414
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (81%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Mitochondria
mRNA Expression Data NASCArray Spot History for 267512_at
Mutant Information
Allele Symbol sse-1S
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 118954
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16145
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation  
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype  
Allelism Evidence Complementation Test; Sequence Identity
Database Release September, 2002
Seed Color Pale Yellow-Green
Embryo Color Pale Yellow-Green
Percent Mutant Seeds 23.5 %
Chi - Square 1.3
Seeds Counted 1097
Percent Top Half 54.6 %
Chi - Square 2.2
Average Seed Length 490 ± 60 µm
Average Embryo Length 350 ± 90 µm