OSU Syngenta vbi

SeedGenes Profile: SSE

Gene Information
Gene Symbol SSE
Chromosome Locus At2g45690   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Peroxisomal Biogenesis Factor (Pex16)
Function Details Required for protein and oil body biogenesis
Gene Evidence
Molecular Complementation
H. Goodman (1 allele)
Border Recovery
H. Goodman (1 allele)
Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:2565 nucleotides
mRNA: 1532 nucleotides
Protein:  367 amino acids
cDNA Status FLcDNA Available: AK175414
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (81%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Mitochondria
mRNA Expression Data NASCArray Spot History for 267512_at
Mutant Information
Allele Symbol sse-1sse-1S
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant H. GoodmanMeinke / Syngenta
Mutant Line Number  118954
Ecotype C24Columbia
Genetic Background  qrt
ABRC Stock  CS16145
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation   
Terminal Phenotype Cotyledon  DetailsCotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release March, 2002September, 2002
Seed Color White to Pale YellowPale Yellow-Green
Embryo Color White to Pale YellowPale Yellow-Green
Percent Mutant Seeds 20.6 %23.5 %
Chi - Square 8.81.3
Seeds Counted 8591097
Percent Top Half 50.8 %54.6 %
Chi - Square <0.12.2
Average Seed Length 460 ± 50 µm490 ± 60 µm
Average Embryo Length 320 ± 100 µm350 ± 90 µm