OSU Syngenta vbi

SeedGenes Profile: SUS 2

Gene Information
Gene Symbol SUS 2
Chromosome Locus At1g80070   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EMB 177 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function PRP8 Splicing Factor
Function Details Pre-mRNA processing (PRP) factor and U5 snRNP component required for spliceosome function
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release March, 2002
Predicted Sequences
Gene:9760 nucleotides
mRNA: 7386 nucleotides
Protein:  2382 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT4G38780.1 (93%)
Plant ESTs: Rice (Oryza sativa) (93%)
Model Genomes:  Homo sapiens (82%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 262068_at
Mutant Information
Allele Symbol sus 2-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Feldmann
Mutant Line Number 6833
Ecotype Wassilewskija
Genetic Background  
ABRC Stock CS84715
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Uncertain
Terminal Phenotype Transition  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2002
Seed Color Pale Yellow-Green
Embryo Color Pale Yellow-Green
Percent Mutant Seeds 27.8 %
Chi - Square 4.1
Seeds Counted 982
Percent Top Half 46.9 %
Chi - Square 1.1
Average Seed Length 480 ± 40 µm
Average Embryo Length 110 ± 60 µm