Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: ABP 1
Gene Information
Gene Symbol
ABP 1
Chromosome Locus
At4g02980
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Auxin Binding Protein 1
Function Details
Mediates auxin-induced cell elongation and cell division during embryogenesis
Gene Evidence
Molecular Complementation
A. Jones (1 allele)
Border Recovery
A. Jones (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
1822 nucleotides
mRNA:
871 nucleotides
Protein:
198 amino acids
cDNA Status
FLcDNA Available:
AF389278
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (89%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Secretory Pathway
SUBA
mRNA Expression Data
NASCArray Spot History for
255412_at
Mutant Information
Allele Symbol
abp 1-1
abp 1-1S
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Jones / Madison
Meinke / Syngenta
Mutant Line Number
39127
Ecotype
Wassilewskija
Columbia
Genetic Background
ABRC Stock
CS6498
CS16148
Mutagen Treatment
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1
5' UTR of At4g02990
Terminal Phenotype
Globular
Details
Globular
Details
Nomarski Phenotype
Images
Images
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Database Release
March, 2002
September, 2002
Seed Color
White
White
Embryo Color
White
White
Percent Mutant Seeds
24.9 %
24.1 %
Chi - Square
<0.1
0.4
Seeds Counted
690
1078
Percent Top Half
50.0 %
52.3 %
Chi - Square
0.0
0.6
Average Seed Length
520 ± 40 µm
510 ± 50 µm
Average Embryo Length
60 ± 20 µm
100 ± 30 µm