SeedGenes Profile: EMB 1047

Gene Information Gene Symbol EMB 1047 Chromosome Locus At1g79560   Alleles in Database 4   See List OR Show All Identity Confidence Confirmed Alias Symbol EMB 156 (D. Meinke) Complemetation Test Gene Class Embryo Defective Predicted Function Chloroplast FtsH-Like Protease Function Details AAA ATPase protein Gene Evidence Double Border Recovery Meinke / Syngenta (2 alleles) Database Release September, 2002 Predicted Sequences Gene: 5792 nucleotides mRNA: 3486 nucleotides Protein:   1008 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT1G50250.1 (34%) Plant ESTs: Cotton (Gossypium) (90%) Model Genomes:   Synechocystis (32%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 262937_at

Mutant Information Allele Symbol emb 1047-1 emb 1047-2 emb 156-1 emb 156-2 Mutant Class Embryo Defective Embryo Defective Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Meinke / Syngenta Meinke / DuPont D. Meinke Mutant Line Number 3218 78923 5226 10D1-L3 Ecotype Columbia Columbia Wassilewskija Columbia Genetic Background   qrt     ABRC Stock CS16102 CS16103     Mutagen Treatment T-DNA T-DNA T-DNA EMS Insertion Mutant Yes   Details Yes   Details No No Flanking Sequence Details  (Help) Details     Location of Mutation Intron 1 5' UTR     Terminal Phenotype Transition  Details Cotyledon  Details Globular Transition Nomarski Phenotype   Images   Images Allelism Evidence Reference Allele Complementation Test; Sequence Identity Complementation Test Complementation Test Database Release September, 2002 September, 2002 December, 2010 December, 2010 Seed Color White White     Embryo Color White White     Percent Mutant Seeds 25.9 % 24.3 % 23.4 % 24.3 % Chi - Square 0.5 0.1     Seeds Counted 1065 1277     Percent Top Half 51.0 % 51.4 % 53.2 %   Chi - Square <0.1 0.3     Average Seed Length 520 ± 40 µm 520 ± 40 µm     Average Embryo Length 110 ± 40 µm 310 ± 120 µm