OSU Syngenta vbi

SeedGenes Profile: EMB 1047

Gene Information
Gene Symbol EMB 1047
Chromosome Locus At1g79560   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EMB 156 (D. Meinke) Complemetation Test
Gene Class Embryo Defective
Predicted Function Chloroplast FtsH-Like Protease
Function Details AAA ATPase protein
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release September, 2002
Predicted Sequences
Gene:5792 nucleotides
mRNA: 3486 nucleotides
Protein:  1008 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT1G50250.1 (34%)
Plant ESTs: Cotton (Gossypium) (90%)
Model Genomes:  Synechocystis (32%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 262937_at
Mutant Information
Allele Symbol emb 1047-1emb 1047-2emb 156-1emb 156-2
Mutant Class Embryo DefectiveEmbryo DefectiveEmbryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / SyngentaMeinke / DuPontD. Meinke
Mutant Line Number 321878923522610D1-L3
Ecotype ColumbiaColumbiaWassilewskijaColumbia
Genetic Background  qrt  
ABRC Stock CS16102CS16103  
Mutagen Treatment T-DNAT-DNAT-DNAEMS
Insertion Mutant Yes   DetailsYes   DetailsNoNo
Flanking Sequence Details  (Help)Details  
Location of Mutation Intron 15' UTR  
Terminal Phenotype Transition  DetailsCotyledon  DetailsGlobularTransition
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence IdentityComplementation TestComplementation Test
Database Release September, 2002September, 2002December, 2010December, 2010
Seed Color WhiteWhite  
Embryo Color WhiteWhite  
Percent Mutant Seeds 25.9 %24.3 %23.4 %24.3 %
Chi - Square 0.50.1  
Seeds Counted 10651277  
Percent Top Half 51.0 %51.4 %53.2 % 
Chi - Square <0.10.3  
Average Seed Length 520 ± 40 µm520 ± 40 µm  
Average Embryo Length 110 ± 40 µm310 ± 120 µm