OSU Syngenta vbi

SeedGenes Profile: EMB 1408

Gene Information
Gene Symbol EMB 1408
Chromosome Locus At5g67570   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EMB 246 (D. Meinke) Complemetation Test
Gene Class Embryo Defective
Predicted Function PPR Protein
Function Details Processing of organellar mRNAs
Gene Evidence
Molecular Complementation
L. Zhang (1 allele)
Border Recovery
L. Zhang (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release September, 2004
Predicted Sequences
Gene:2523 nucleotides
mRNA: 1863 nucleotides
Protein:  611 amino acids
cDNA Status FLcDNA Available: AK229379
Top BLAST Hits
Arabidopsis: AT1G30610.1 (40%)
Plant ESTs: Medicago truncatula (60%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 247004_at
Mutant Information
Allele Symbol emb 1408emb 246dg 1
Mutant Class Embryo DefectiveEmbryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / DuPontZhang / ABRC
Mutant Line Number 212811989 
Ecotype ColumbiaWassilewskijaColumbia
Genetic Background    
ABRC Stock    
Mutagen Treatment T-DNAT-DNAT-DNA
Insertion Mutant Yes   DetailsNoYes   Details
Flanking Sequence Details  (Help)  
Location of Mutation Intron 1 to Exon 2 5' UTR
Terminal Phenotype Transition  DetailsTransitionPigment Defective
Nomarski Phenotype   Images
Allelism Evidence Reference AlleleComplementation TestSequence Identity
Database Release September, 2004December, 2010December, 2010
Seed Color White  
Embryo Color White  
Percent Mutant Seeds 25.1 %23.9 % 
Chi - Square <0.1  
Seeds Counted 945  
Percent Top Half 51.9 %  
Chi - Square 0.3  
Average Seed Length 510 ± 70 µm  
Average Embryo Length 100 ± 50 µm