OSU Syngenta vbi

SeedGenes Profile: EMB 1691

Gene Information
Gene Symbol EMB 1691
Chromosome Locus At4g09980   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function DNA Methyltransferase
Function Details DNA methylation; chromatin structure
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release September, 2003
Predicted Sequences
Gene:4554 nucleotides
mRNA: 3393 nucleotides
Protein:  963 amino acids
cDNA Status FLcDNA Available: AY046016
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Vitis vinifera (51%)
Model Genomes:  Danio rerio (53%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 255015_at
    
Mutant Information
Allele Symbol emb 1691-1emb 1691-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / Syngenta
Mutant Line Number 3480647164
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock CS16197CS16198
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence Details  (Help)Details
Location of Mutation Upstream to Exon 1Exon 3
Terminal Phenotype Globular  DetailsGlobular  Details
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release September, 2003September, 2003
Seed Color Pale Yellow-GreenPale Yellow
Embryo Color Pale Yellow-GreenPale Yellow
Percent Mutant Seeds 24.6 %26.9 %
Chi - Square 0.11.9
Seeds Counted 957985
Percent Top Half 45.3 %48.8 %
Chi - Square 2.10.2
Average Seed Length 460 ± 70 µm520 ± 60 µm
Average Embryo Length 90 ± 40 µm70 ± 40 µm