Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: EMB 1796
Gene Information
Gene Symbol
EMB 1796
Chromosome Locus
At3g49240
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
PPR Protein
Function Details
Processing of organellar mRNAs
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Vernon / Salk (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
2122 nucleotides
mRNA:
2122 nucleotides
Protein:
629 amino acids
cDNA Status
FLcDNA Available:
AY099591
Top BLAST Hits
Arabidopsis
:
AT1G10270.1 (35%)
Plant ESTs:
Medicago truncatula (64%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Mitochondria
SUBA
mRNA Expression Data
NASCArray Spot History for
252305_at
Mutant Information
Allele Symbol
emb 1796-1
emb 1796-2
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Meinke / Syngenta
Vernon / Salk
Mutant Line Number
39075
SALK_069042
Ecotype
Columbia
Columbia
Genetic Background
ABRC Stock
CS16034
Mutagen Treatment
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
3' UTR to Downstream
Exon 1
Terminal Phenotype
Globular
Details
Globular
Nomarski Phenotype
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Database Release
March, 2002
December, 2010
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
28.1 %
Chi - Square
2.4
Seeds Counted
474
Percent Top Half
45.9 %
Chi - Square
0.9
Average Seed Length
420 ± 40 µm
Average Embryo Length
30 ± 30 µm