OSU Syngenta vbi

SeedGenes Profile: EMB 1796

Gene Information
Gene Symbol EMB 1796
Chromosome Locus At3g49240   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function PPR Protein
Function Details Processing of organellar mRNAs
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Vernon / Salk (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:2122 nucleotides
mRNA: 2122 nucleotides
Protein:  629 amino acids
cDNA Status FLcDNA Available: AY099591
Top BLAST Hits
Arabidopsis: AT1G10270.1 (35%)
Plant ESTs: Medicago truncatula (64%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Mitochondria
SUBA
mRNA Expression Data NASCArray Spot History for 252305_at
    
Mutant Information
Allele Symbol emb 1796-1emb 1796-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaVernon / Salk
Mutant Line Number 39075SALK_069042
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock CS16034 
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence Details  (Help) 
Location of Mutation 3' UTR to DownstreamExon 1
Terminal Phenotype Globular  DetailsGlobular
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release March, 2002December, 2010
Seed Color White 
Embryo Color White 
Percent Mutant Seeds 28.1 % 
Chi - Square 2.4 
Seeds Counted 474 
Percent Top Half 45.9 % 
Chi - Square 0.9 
Average Seed Length 420 ± 40 µm 
Average Embryo Length 30 ± 30 µm