Aug 17, 2018 4:41 PM
Home
|
Access Page
|
Database Query
SeedGenes Profile: EMB 2001
Gene Information
Gene Symbol
EMB 2001
Chromosome Locus
At2g22870
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Uncertain
Function Details
Putative ribosome biogenesis GTPase
Gene Evidence
Border Recovery
Meinke / Syngenta (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2004
Predicted Sequences
Gene:
1648 nucleotides
mRNA:
1105 nucleotides
Protein:
300 amino acids
cDNA Status
FLcDNA Available:
AY087277
Top BLAST Hits
Arabidopsis
:
AT5G11480.1 (54%)
Plant ESTs:
Brassica napus (85%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Mitochondria
SUBA
mRNA Expression Data
NASCArray Spot History for
266801_at
Mutant Information
Allele Symbol
emb 2001-1
emb 2001-2
Mutant Class
Embryo Defective
Seed Pigment
Source of Mutant
Meinke / Syngenta
Meinke / Syngenta
Mutant Line Number
54846
98507
Ecotype
Columbia
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1
Terminal Phenotype
Transition
Details
Cotyledon
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Database Release
September, 2004
September, 2004
Seed Color
White
Pale Yellow
Embryo Color
White
Pale Yellow
Percent Mutant Seeds
25.3 %
24.9 %
Chi - Square
0.1
<0.1
Seeds Counted
1105
936
Percent Top Half
51.8 %
48.5 %
Chi - Square
0.4
0.2
Average Seed Length
510 ± 60 µm
Average Embryo Length
100 ± 40 µm