OSU Syngenta vbi

SeedGenes Profile: EMB 2410

Gene Information
Gene Symbol EMB 2410
Chromosome Locus At2g25660   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Unknown
Function Details None
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release March, 2003
Predicted Sequences
Gene:11188 nucleotides
mRNA: 6694 nucleotides
Protein:  2146 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (57%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 265896_at
    
Mutant Information
Allele Symbol emb 2410-1emb 2410-2emb 2410-3emb 2410-4
Mutant Class Embryo DefectiveEmbryo DefectiveEmbryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / SyngentaMeinke / SalkMeinke / Salk
Mutant Line Number 7948651436SALK_048770SALK_118377
Ecotype ColumbiaColumbiaColumbiaColumbia
Genetic Background qrt   
ABRC Stock CS16177 CS24082CS24083
Mutagen Treatment T-DNAT-DNAT-DNAT-DNA
Insertion Mutant Yes   DetailsYes   DetailsYes   DetailsYes   Details
Flanking Sequence Details  (Help)   
Location of Mutation Intron 2 to Exon 3 Exon 9Exon 1
Terminal Phenotype Globular  DetailsNot AvailableGlobular  DetailsGlobular  Details
Nomarski Phenotype   Images  Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence IdentityComplementation Test; Sequence IdentityComplementation Test; Sequence Identity
Database Release March, 2003March, 2003March, 2004March, 2004
Seed Color White WhiteWhite
Embryo Color White WhiteWhite
Percent Mutant Seeds 27.0 % 26.5 %25.2 %
Chi - Square 2.4 1.3<0.1
Seeds Counted 1050 10631039
Percent Top Half 51.8 % 54.6 %53.4 %
Chi - Square 0.4 1.21.2
Average Seed Length 440 ± 50 µm 470 ± 60 µm480 ± 70 µm
Average Embryo Length 60 ± 40 µm 80 ± 50 µm70 ± 40 µm