OSU Syngenta vbi

SeedGenes Profile: EMB 2726

Gene Information
Gene Symbol EMB 2726
Chromosome Locus At4g29060   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Translation Elongation Factor Ts
Function Details Translation in chloroplast
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Beligni / SAIL (2 alleles)
Database Release September, 2002
Predicted Sequences
Gene:4312 nucleotides
mRNA: 3348 nucleotides
Protein:  953 amino acids
cDNA Status FLcDNA Available: AY056792
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (80%)
Model Genomes:  Synechocystis (64%)
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 253758_at
    
Mutant Information
Allele Symbol emb 2726-1emb 2726-2emb 2726-3
Mutant Class Embryo DefectiveEmbryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaBeligni / SAILBeligni / SAIL
Mutant Line Number 129824SAIL_1252_B12SAIL_540_B10
Ecotype ColumbiaColumbiaColumbia
Genetic Background    
ABRC Stock CS16123  
Mutagen Treatment T-DNAT-DNAT-DNA
Insertion Mutant Yes   DetailsYes   DetailsYes   Details
Flanking Sequence Details  (Help)  
Location of Mutation Exon 7 to DownstreamIntron 5Exon 6
Terminal Phenotype Globular  DetailsNot AvailableNot Available
Nomarski Phenotype   Images
Allelism Evidence Reference AlleleSequence IdentitySequence Identity
Database Release September, 2002October, 2007October, 2007
Seed Color White  
Embryo Color White  
Percent Mutant Seeds 24.3 %  
Chi - Square 0.3  
Seeds Counted 1028  
Percent Top Half 46.8 %  
Chi - Square 1.0  
Average Seed Length 490 ± 50 µm  
Average Embryo Length 70 ± 20 µm