Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: EMB 2738
Gene Information
Gene Symbol
EMB 2738
Chromosome Locus
At3g12080
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Uncertain
Function Details
Putative ribosome biogenesis GTPase (EngA)
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
March, 2003
Predicted Sequences
Gene:
4347 nucleotides
mRNA:
2209 nucleotides
Protein:
663 amino acids
cDNA Status
FLcDNA Available:
AY080655
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Spruce (69%)
Model Genomes:
Synechocystis (46%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
256274_at
Mutant Information
Allele Symbol
emb 2738-1
emb 2738-2
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Meinke / Syngenta
Meinke / Salk
Mutant Line Number
121994
SALK_104755
Ecotype
Columbia
Columbia
Genetic Background
ABRC Stock
CS16188
CS24090
Mutagen Treatment
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Upstream
Intron 6
Terminal Phenotype
Globular
Details
Globular
Details
Nomarski Phenotype
Images
Images
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Database Release
March, 2003
March, 2004
Seed Color
White
White
Embryo Color
White
White
Percent Mutant Seeds
24.7 %
25.2 %
Chi - Square
<0.1
<0.1
Seeds Counted
1062
1121
Percent Top Half
48.8 %
49.1 %
Chi - Square
0.1
<0.1
Average Seed Length
520 ± 30 µm
500 ± 60 µm
Average Embryo Length
100 ± 30 µm
70 ± 30 µm