Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: EMB 3004
Gene Information
Gene Symbol
EMB 3004
Chromosome Locus
At3g06350
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
MEE 32
(Sundaresan) Sequence Identity
Gene Class
Embryo Defective
Predicted Function
Dehydroquinate Dehydratase; Shikimate Dehydrogenase
Function Details
Chorismate biosynthesis
Gene Evidence
Single Border Recovery
Meinke / Genoplante (1 allele)
Border Recovery
Singh / EXOTIC (1 allele)
Database Release
September, 2004
Predicted Sequences
Gene:
3450 nucleotides
mRNA:
2096 nucleotides
Protein:
603 amino acids
cDNA Status
FLcDNA Available:
BX823611
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (88%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
258908_at
Mutant Information
Allele Symbol
emb 3004-1
emb 3004-2
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Meinke / Genoplante
Sing / EXOTIC
Mutant Line Number
FBU3
GT544254
Ecotype
Wassilewskija
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Transposon
Insertion Mutant
Yes
Details
Yes
Details
Flanking Sequence
Location of Mutation
5` UTR to Exon 1
Exon 2
Terminal Phenotype
Cotyledon
Details
Not Available
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Sequence Identity
Database Release
September, 2004
October, 2007
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
24.6 %
Chi - Square
0.1
Seeds Counted
1017
Percent Top Half
56.0 %
Chi - Square
3.6
Average Seed Length
460 ± 60 µm
Average Embryo Length
140 ± 100 µm