OSU Syngenta vbi

SeedGenes Profile: FUS 6

Gene Information
Gene Symbol FUS 6
Chromosome Locus At3g61140   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EMB 78 (D. Meinke) Alternate Name
COP 11 (X.W. Deng) Alternate Name
Gene Class Seed Pigment
Predicted Function Component of COP9 Signalosome
Function Details Light-regulated signal transduction and protein degradation
Gene Evidence
Border Recovery
D. Meinke (1 allele)
Single Border Recovery
Meinke / Syngenta (1 allele)
RFLP Identified
D. Meinke (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:3856 nucleotides
mRNA: 1857 nucleotides
Protein:  441 amino acids
cDNA Status FLcDNA Available: AF360295
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (89%)
Model Genomes:  Danio rerio (46%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 251311_at
Mutant Information
Allele Symbol fus 6-1Sfus 6-1fus 6-2
Mutant Class Embryo DefectiveSeed PigmentSeed Pigment
Source of Mutant Meinke / SyngentaMeinke / FeldmannMeinke / Feldmann
Mutant Line Number 104315784759
Ecotype ColumbiaWassilewskijaWassilewskija
Genetic Background    
ABRC Stock CS16057CS6260CS6261
Mutagen Treatment T-DNAT-DNAT-DNA
Insertion Mutant Yes   DetailsYes   DetailsYes   Details
Flanking Sequence Details  (Help)  
Location of Mutation Exon 1Exon 15' UTR
Terminal Phenotype Cotyledon  DetailsFuscaFusca
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence IdentitySequence Identity
Database Release March, 2002March, 2002March, 2002
Seed Color FuscaFuscaFusca
Embryo Color FuscaFuscaFusca
Percent Mutant Seeds 23.2 %22.9 %22.7 %
Chi - Square
Seeds Counted 1119886980
Percent Top Half 42.3 %53.7 %53.2 %
Chi - Square
Average Seed Length 500 ± 50 µm  
Average Embryo Length 410 ± 60 µm