SeedGenes Profile: PDE 149

Gene Information Gene Symbol PDE 149 Chromosome Locus At5g12130   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol AtTERC (H. Cho) Alternate Name Gene Class Seed Pigment Predicted Function Transmembrane Transport Protein Function Details   Gene Evidence Molecular Complementation H. Cho (1 allele) Border Recovery Cho / Salk (1 allele) Border Recovery Cho / GABI (1 allele) Single Border Recovery Meinke / Syngenta (1 allele) Database Release September, 2002 Predicted Sequences Gene: 2892 nucleotides mRNA: 1505 nucleotides Protein:   384 amino acids cDNA Status FLcDNA Available: AY086401 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (80%) Model Genomes:   Escherichia coli (43%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 250315_at

Mutant Information Allele Symbol pde 149 atterC-1 atterC-2 Mutant Class Seed Pigment Seed Pigment Seed Pigment Source of Mutant Meinke / Syngenta Cho / Salk Cho / GABI Mutant Line Number 9021 SALK_014736 GABI_844D10 Ecotype Columbia Columbia Columbia Genetic Background       ABRC Stock CS16130     Mutagen Treatment T-DNA T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Flanking Sequence Details  (Help)     Location of Mutation Intron 6 Intron 2 Exon 3 Terminal Phenotype Pigment Defective Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Sequence Identity Database Release September, 2002 December, 2010 December, 2010 Seed Color Pale Yellow     Embryo Color Pale Yellow     Percent Mutant Seeds 24.5 %     Chi - Square 0.2     Seeds Counted 1099     Percent Top Half 55.3 %     Chi - Square 3.1     Average Seed Length       Average Embryo Length