Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: PDE 191
Gene Information
Gene Symbol
PDE 191
Chromosome Locus
At4g38160
Alleles in Database
3
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Uncertain
Function Details
mTERF domain protein
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Meinke / SAIL (1 allele)
Border Recovery
Meinke / Salk (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
2028 nucleotides
mRNA:
1677 nucleotides
Protein:
363 amino acids
cDNA Status
FLcDNA Available:
AY093769
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Populus (71%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
253028_at
Mutant Information
Allele Symbol
pde 191-1
pde 191-2
pde 191-3
Mutant Class
Seed Pigment
Seed Pigment
Seed Pigment
Source of Mutant
Meinke / Syngenta
Meinke / SAIL
Meinke / Salk
Mutant Line Number
14891
SAIL_360_H09
SALK_098509
Ecotype
Columbia
Columbia
Columbia
Genetic Background
ABRC Stock
CS16125
Mutagen Treatment
T-DNA
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 1 in 5' UTR to Exon 2
Exon 1
5' UTR
Terminal Phenotype
Pigment Defective
Pigment Defective
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Complementation Test; Sequence Identity
Database Release
September, 2002
December, 2010
December, 2010
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
25.9 %
27.5 %
25.2 %
Chi - Square
0.4
1.0
0.0
Seeds Counted
1040
269
159
Percent Top Half
48.7 %
Chi - Square
0.2
Average Seed Length
Average Embryo Length