OSU Syngenta vbi

SeedGenes Profile: PDE 191

Gene Information
Gene Symbol PDE 191
Chromosome Locus At4g38160   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function Uncertain
Function Details mTERF domain protein
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Meinke / SAIL (1 allele)
Border Recovery
Meinke / Salk (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:2028 nucleotides
mRNA: 1677 nucleotides
Protein:  363 amino acids
cDNA Status FLcDNA Available: AY093769
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Populus (71%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 253028_at
    
Mutant Information
Allele Symbol pde 191-1pde 191-2pde 191-3
Mutant Class Seed PigmentSeed PigmentSeed Pigment
Source of Mutant Meinke / SyngentaMeinke / SAILMeinke / Salk
Mutant Line Number 14891SAIL_360_H09SALK_098509
Ecotype ColumbiaColumbiaColumbia
Genetic Background    
ABRC Stock CS16125  
Mutagen Treatment T-DNAT-DNAT-DNA
Insertion Mutant Yes   DetailsYes   DetailsYes   Details
Flanking Sequence Details  (Help)  
Location of Mutation Intron 1 in 5' UTR to Exon 2Exon 15' UTR
Terminal Phenotype Pigment DefectivePigment DefectivePigment Defective
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence IdentityComplementation Test; Sequence Identity
Database Release September, 2002December, 2010December, 2010
Seed Color White  
Embryo Color White  
Percent Mutant Seeds 25.9 %27.5 %25.2 %
Chi - Square 0.41.00.0
Seeds Counted 1040269159
Percent Top Half 48.7 %  
Chi - Square 0.2  
Average Seed Length    
Average Embryo Length