SeedGenes Profile: RPN 1A

Gene Information Gene Symbol RPN 1A Chromosome Locus At2g20580   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function 26S Proteasome Subunit Function Details Protein degradation and cell cycle progression Gene Evidence Phenotypic Reversion U. Grossniklaus (1 allele) Border Recovery Grossniklaus / Sundaresan (1 allele) Border Recovery Grossniklaus / Salk (2 alleles) Database Release October, 2007 Predicted Sequences Gene: 5856 nucleotides mRNA: 3043 nucleotides Protein:   891 amino acids cDNA Status FLcDNA Available: AF360216 Top BLAST Hits Arabidopsis: AT4G28470.1 (90%) Plant ESTs: Tomato (Lycopersicon esculentum) (83%) Model Genomes:   Homo sapiens (51%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 263716_at

Mutant Information Allele Symbol rpn 1a-1 rpn 1a-2 rpn 1a-3 Mutant Class Embryo Defective Embryo Defective Embryo Defective Source of Mutant Grossniklaus / Sundaresan Grossniklaus / Salk Grossniklaus / Salk Mutant Line Number SGT4227 SALK_012604 SALK_030503 Ecotype   Columbia Columbia Genetic Background       ABRC Stock       Mutagen Treatment Transposon T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Flanking Sequence       Location of Mutation Exon 1 Exon 2 Upstream Terminal Phenotype Globular Globular Globular Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Sequence Identity Database Release October, 2007 October, 2007 October, 2007 Seed Color       Embryo Color       Percent Mutant Seeds       Chi - Square       Seeds Counted       Percent Top Half       Chi - Square       Average Seed Length       Average Embryo Length