OSU Syngenta vbi

SeedGenes Profile: ABP 1

Gene Information
Gene Symbol ABP 1
Chromosome Locus At4g02980   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Auxin Binding Protein 1
Function Details Mediates auxin-induced cell elongation and cell division during embryogenesis
Gene Evidence
Molecular Complementation
A. Jones (1 allele)
Border Recovery
A. Jones (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:1822 nucleotides
mRNA: 871 nucleotides
Protein:  198 amino acids
cDNA Status FLcDNA Available: AF389278
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (89%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Secretory Pathway
SUBA
mRNA Expression Data NASCArray Spot History for 255412_at
    
Mutant Information
Allele Symbol abp 1-1abp 1-1S
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Jones / MadisonMeinke / Syngenta
Mutant Line Number  39127
Ecotype WassilewskijaColumbia
Genetic Background   
ABRC Stock CS6498CS16148
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence  Details  (Help)
Location of Mutation Exon 15' UTR of At4g02990
Terminal Phenotype Globular  DetailsGlobular  Details
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release March, 2002September, 2002
Seed Color WhiteWhite
Embryo Color WhiteWhite
Percent Mutant Seeds 24.9 %24.1 %
Chi - Square <0.10.4
Seeds Counted 6901078
Percent Top Half 50.0 %52.3 %
Chi - Square 0.00.6
Average Seed Length 520 ± 40 µm510 ± 50 µm
Average Embryo Length 60 ± 20 µm100 ± 30 µm