Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: AtSWI 3A
Gene Information
Gene Symbol
AtSWI 3A
Chromosome Locus
At2g47620
Alleles in Database
4
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
DNA Binding Protein
Function Details
Subunit of SWI/SNF chromatin remodeling complex
Gene Evidence
Double Border Recovery
Jerzmanowski / Salk (1 allele)
Double Border Recovery
Meinke; Jerzmanowski / Salk (2 alleles)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
2455 nucleotides
mRNA:
1776 nucleotides
Protein:
512 amino acids
cDNA Status
FLcDNA Available:
AY062794
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (69%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
245149_at
Mutant Information
Allele Symbol
atswi 3a-2
Mutant Class
Embryo Defective
Source of Mutant
Meinke; Jerzmanowski / Salk
Mutant Line Number
SALK_065548
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 2
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Early Globular
Images
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
27.0 %
Chi - Square
2.3
Seeds Counted
1109
Percent Top Half
44.5 %
Chi - Square
3.4
Average Seed Length
370 ± 100 µm
Average Embryo Length
20 ± 10 µm