SeedGenes Profile: AtSWI 3A

Gene Information Gene Symbol AtSWI 3A Chromosome Locus At2g47620   Alleles in Database 4   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function DNA Binding Protein Function Details Subunit of SWI/SNF chromatin remodeling complex Gene Evidence Double Border Recovery Jerzmanowski / Salk (1 allele) Double Border Recovery Meinke; Jerzmanowski / Salk (2 alleles) Single Border Recovery Meinke / Salk (1 allele) Database Release October, 2007 Predicted Sequences Gene: 2455 nucleotides mRNA: 1776 nucleotides Protein:   512 amino acids cDNA Status FLcDNA Available: AY062794 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (69%) Model Genomes:   None Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 245149_at

Mutant Information Allele Symbol atswi 3a-2 atswi 3a-1 atswi 3a-3 atswi 3a-4 Mutant Class Embryo Defective Embryo Defective Embryo Defective Embryo Defective Source of Mutant Meinke; Jerzmanowski / Salk Jerzmanowski / Salk Meinke; Jerzmanowski / Salk Meinke / Salk Mutant Line Number SALK_065548 SALK_035320 SALK_068234 SALK_039867 Ecotype Columbia Columbia Columbia Columbia Genetic Background         ABRC Stock         Mutagen Treatment T-DNA T-DNA T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Yes   Details Flanking Sequence         Location of Mutation Exon 2 Exon 3 Exon 3 Exon 3 Terminal Phenotype Preglobular  Details Globular Preglobular  Details Preglobular  Details Nomarski Phenotype Early Globular  Images Early Globular  Images Globular  Images Allelism Evidence Reference Allele Sequence Identity Complementation Test; Sequence Identity Complementation Test; Sequence Identity Database Release October, 2007 October, 2007 October, 2007 October, 2007 Seed Color White   White White Embryo Color White   White White Percent Mutant Seeds 27.0 %   23.4 % 24.8 % Chi - Square 2.3   1.4 <0.1 Seeds Counted 1109   1029 1052 Percent Top Half 44.5 %   46.9 % 50.6 % Chi - Square 3.4   0.93 <0.1 Average Seed Length 370 ± 100 µm   420 ± 70 µm 480 ± 70 µm Average Embryo Length 20 ± 10 µm   15 ± 0 µm 20 ± 20 µm