OSU Syngenta vbi

SeedGenes Profile: AtSWI 3A

Gene Information
Gene Symbol AtSWI 3A
Chromosome Locus At2g47620   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function DNA Binding Protein
Function Details Subunit of SWI/SNF chromatin remodeling complex
Gene Evidence
Double Border Recovery
Jerzmanowski / Salk (1 allele)
Double Border Recovery
Meinke; Jerzmanowski / Salk (2 alleles)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release October, 2007
Predicted Sequences
Gene:2455 nucleotides
mRNA: 1776 nucleotides
Protein:  512 amino acids
cDNA Status FLcDNA Available: AY062794
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (69%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 245149_at
Mutant Information
Allele Symbol atswi 3a-4
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_039867
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 3
Terminal Phenotype Preglobular  Details
Nomarski Phenotype Globular  Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release October, 2007
Seed Color White
Embryo Color White
Percent Mutant Seeds 24.8 %
Chi - Square <0.1
Seeds Counted 1052
Percent Top Half 50.6 %
Chi - Square <0.1
Average Seed Length 480 ± 70 µm
Average Embryo Length 20 ± 20 µm