Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: DET 1
Gene Information
Gene Symbol
DET 1
Chromosome Locus
At4g10180
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
FUS 2
(S. Misera) Complemetation Test
Gene Class
Seed Pigment
Predicted Function
Nuclear-Localized Protein
Function Details
Light-regulated signal transduction
Gene Evidence
Sequenced Mutant Allele
J. Chory (1 allele)
Molecular Complementation
J. Chory (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
2814 nucleotides
mRNA:
1842 nucleotides
Protein:
543 amino acids
cDNA Status
FLcDNA Available:
BX826906
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Tomato (Lycopersicon esculentum) (71%)
Model Genomes:
Danio rerio (30%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
255799_at
Mutant Information
Allele Symbol
det 1-1S
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
100654
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16146
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 8 to Exon 9
Terminal Phenotype
Fusca
Nomarski Phenotype
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
September, 2002
Seed Color
Fusca
Embryo Color
Fusca
Percent Mutant Seeds
26.9 %
Chi - Square
2.2
Seeds Counted
1103
Percent Top Half
48.5 %
Chi - Square
0.3
Average Seed Length
Average Embryo Length