SeedGenes Profile: DET 1

Gene Information Gene Symbol DET 1 Chromosome Locus At4g10180   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol FUS 2 (S. Misera) Complemetation Test Gene Class Seed Pigment Predicted Function Nuclear-Localized Protein Function Details Light-regulated signal transduction Gene Evidence Sequenced Mutant Allele J. Chory (1 allele) Molecular Complementation J. Chory (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Database Release March, 2002 Predicted Sequences Gene: 2814 nucleotides mRNA: 1842 nucleotides Protein:   543 amino acids cDNA Status FLcDNA Available: BX826906 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Tomato (Lycopersicon esculentum) (71%) Model Genomes:   Danio rerio (30%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 255799_at

Mutant Information Allele Symbol det 1-1 det 1-1S Mutant Class Seed Pigment Seed Pigment Source of Mutant J. Chory Meinke / Syngenta Mutant Line Number   100654 Ecotype Columbia Columbia Genetic Background     ABRC Stock CS6158 CS16146 Mutagen Treatment Uncertain T-DNA Insertion Mutant No Yes   Details Flanking Sequence   Details  (Help) Location of Mutation Intron 1 Intron 8 to Exon 9 Terminal Phenotype Fusca Fusca Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release March, 2002 September, 2002 Seed Color Fusca Fusca Embryo Color Fusca Fusca Percent Mutant Seeds 22.6 % 26.9 % Chi - Square 3.7 2.2 Seeds Counted 1170 1103 Percent Top Half 53.0 % 48.5 % Chi - Square 1.0 0.3 Average Seed Length     Average Embryo Length