SeedGenes Profile: EDD

Gene Information Gene Symbol EDD Chromosome Locus At3g48110   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Chloroplast Glycyl tRNA Synthetase Function Details Translation in chloroplast Gene Evidence Phenotypic Reversion T. Altmann (1 allele) Border Recovery T. Altmann (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Database Release March, 2002 Predicted Sequences Gene: 8146 nucleotides mRNA: 3496 nucleotides Protein:   1067 amino acids cDNA Status FLcDNA Available: AY136413 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Rice (Oryza sativa) (69%) Model Genomes:   Synechocystis (56%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 252404_at

Mutant Information Allele Symbol edd-1S edd-1 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta T. Altmann Mutant Line Number 56882   Ecotype Columbia C24 Genetic Background     ABRC Stock CS16005   Mutagen Treatment T-DNA Transposon Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help)   Location of Mutation Exon 8 Intron 1 to Exon 2 Terminal Phenotype Globular  Details Transition Nomarski Phenotype   Images Allelism Evidence Reference Allele Sequence Identity Database Release March, 2002 March, 2002 Seed Color White   Embryo Color White   Percent Mutant Seeds 27.2 %   Chi - Square 2.5   Seeds Counted 1001   Percent Top Half 52.9 %   Chi - Square 0.9   Average Seed Length 500 ± 40 µm   Average Embryo Length 70 ± 20 µm