Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: EMB 1275
Gene Information
Gene Symbol
EMB 1275
Chromosome Locus
At1g55350
Alleles in Database
6
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
AtDEK 1
(Olsen; Ingram) Sequence Identity
EMB 80
(D. Meinke) Complemetation Test
Gene Class
Embryo Defective
Predicted Function
Calpain-Type Cysteine Protease
Function Details
Similar to maize DEK1
Gene Evidence
Border Recovery
Olsen / Dellaporta (1 allele)
Border Recovery
Olsen / GABI (1 allele)
Border Recovery
Ingram / Salk (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2004
Predicted Sequences
Gene:
10803 nucleotides
mRNA:
7220 nucleotides
Protein:
2151 amino acids
cDNA Status
FLcDNA Available:
AY061803
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Rice (Oryza sativa) (70%)
Model Genomes:
Danio rerio (34%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
259646_at
Mutant Information
Allele Symbol
emb 1275-1
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
16696
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 5 to Exon 6
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
September, 2004
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
21.8 %
Chi - Square
5.6
Seeds Counted
1010
Percent Top Half
53.6 %
Chi - Square
1.2
Average Seed Length
460 ± 70 µm
Average Embryo Length
15 ± 0 µm