SeedGenes Profile: EMB 1379

Gene Information Gene Symbol EMB 1379 Chromosome Locus At5g21140   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Uncertain Function Details Weak similarity to DNA repair protein (Nse1) Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Single Border Recovery Meinke / Salk (1 allele) Database Release March, 2003 Predicted Sequences Gene: 2524 nucleotides mRNA: 1357 nucleotides Protein:   312 amino acids cDNA Status FLcDNA Available: BX831078 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (82%) Model Genomes:   None Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA

Mutant Information Allele Symbol emb 1379-1 Mutant Class Embryo Defective Source of Mutant Meinke / Syngenta Mutant Line Number 17358 Ecotype Columbia Genetic Background   ABRC Stock CS16151 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence Details  (Help) Location of Mutation Intron 1 Terminal Phenotype Preglobular  Details Nomarski Phenotype Globular  Images Allelism Evidence Reference Allele Database Release March, 2003 Seed Color White Embryo Color White Percent Mutant Seeds 26.5 % Chi - Square 1.1 Seeds Counted 921 Percent Top Half 47.5 % Chi - Square 0.6 Average Seed Length 460 ± 50 µm Average Embryo Length 15 ± 10 µm