OSU Syngenta vbi

SeedGenes Profile: EMB 1507

Gene Information
Gene Symbol EMB 1507
Chromosome Locus At1g20960   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Spliceosome-Associated RNA Helicase
Function Details Similar to human U5 200 kD splicing factor
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Border Recovery
Meinke / Syngenta (2 alleles)
Database Release September, 2002
Predicted Sequences
Gene:8167 nucleotides
mRNA: 6832 nucleotides
Protein:  2171 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT2G42270.1 (82%)
Plant ESTs: Vitis vinifera (79%)
Model Genomes:  Danio rerio (56%)
Subcellular Localization TargetP Targeted to Mitochondria
mRNA Expression Data NASCArray Spot History for 262800_at
Mutant Information
Allele Symbol emb 1507-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 84939
Ecotype Columbia
Genetic Background  
ABRC Stock CS16091
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 1
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release September, 2002
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 23.2 %
Chi - Square 2.0
Seeds Counted 1154
Percent Top Half 50.4 %
Chi - Square <0.1
Average Seed Length 480 ± 30 µm
Average Embryo Length 110 ± 50 µm