SeedGenes Profile: EMB 1644

Gene Information Gene Symbol EMB 1644 Chromosome Locus At5g27720   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function U6 snRNA Associated Protein (LSm4) Function Details Component of spliceosome involved in pre-mRNA splicing Gene Evidence Double Border Recovery Meinke / Syngenta (2 alleles) Database Release March, 2003 Predicted Sequences Gene: 2044 nucleotides mRNA: 912 nucleotides Protein:   129 amino acids cDNA Status FLcDNA Available: AY087911 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Medicago truncatula (98%) Model Genomes:   Drosophila melanogaster (82%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 246741_at

Mutant Information Allele Symbol emb 1644-2 Mutant Class Embryo Defective Source of Mutant Meinke / Syngenta Mutant Line Number 32187 Ecotype Columbia Genetic Background   ABRC Stock CS16156 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence Details  (Help) Location of Mutation Exon 5 to Downstream Terminal Phenotype Globular  Details Nomarski Phenotype   Images Allelism Evidence Reference Allele Database Release March, 2003 Seed Color White Embryo Color White Percent Mutant Seeds 24.0 % Chi - Square 0.6 Seeds Counted 1116 Percent Top Half 50.4 % Chi - Square <0.1 Average Seed Length 520 ± 50 µm Average Embryo Length 30 ± 20 µm