SeedGenes Profile: EMB 1796

Gene Information Gene Symbol EMB 1796 Chromosome Locus At3g49240   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function PPR Protein Function Details Processing of organellar mRNAs Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Single Border Recovery Vernon / Salk (1 allele) Database Release March, 2002 Predicted Sequences Gene: 2122 nucleotides mRNA: 2122 nucleotides Protein:   629 amino acids cDNA Status FLcDNA Available: AY099591 Top BLAST Hits Arabidopsis: AT1G10270.1 (35%) Plant ESTs: Medicago truncatula (64%) Model Genomes:   None Subcellular Localization TargetP Targeted to Mitochondria SUBA mRNA Expression Data NASCArray Spot History for 252305_at

Mutant Information Allele Symbol emb 1796-1 emb 1796-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Vernon / Salk Mutant Line Number 39075 SALK_069042 Ecotype Columbia Columbia Genetic Background     ABRC Stock CS16034   Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help)   Location of Mutation 3' UTR to Downstream Exon 1 Terminal Phenotype Globular  Details Globular Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release March, 2002 December, 2010 Seed Color White   Embryo Color White   Percent Mutant Seeds 28.1 %   Chi - Square 2.4   Seeds Counted 474   Percent Top Half 45.9 %   Chi - Square 0.9   Average Seed Length 420 ± 40 µm   Average Embryo Length 30 ± 30 µm