OSU Syngenta vbi

SeedGenes Profile: EMB 1899

Gene Information
Gene Symbol EMB 1899
Chromosome Locus At5g03800   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol EMB 175 (D. Vernon) Sequence Identity
EMB 166 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function PPR Protein
Function Details Processing of organellar mRNAs
Gene Evidence
Single Border Recovery
Vernon / Feldmann (1 allele)
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release March, 2002
Predicted Sequences
Gene:2807 nucleotides
mRNA: 2807 nucleotides
Protein:  896 amino acids
cDNA Status FLcDNA Available: AK117204
Top BLAST Hits
Arabidopsis: AT5G16860.1 (31%)
Plant ESTs: Rice (Oryza sativa) (44%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 250893_at
Mutant Information
Allele Symbol emb 1899-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 73984
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16039
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 1
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2002
Seed Color White
Embryo Color White
Percent Mutant Seeds 25.6 %
Chi - Square 0.2
Seeds Counted 1200
Percent Top Half 48.9 %
Chi - Square 0.2
Average Seed Length 490 ± 40 µm
Average Embryo Length 70 ± 20 µm