SeedGenes Profile: EMB 1899

Gene Information Gene Symbol EMB 1899 Chromosome Locus At5g03800   Alleles in Database 4   See List OR Show All Identity Confidence Confirmed Alias Symbol EMB 175 (D. Vernon) Sequence Identity EMB 166 (D. Meinke) Alternate Name Gene Class Embryo Defective Predicted Function PPR Protein Function Details Processing of organellar mRNAs Gene Evidence Single Border Recovery Vernon / Feldmann (1 allele) Double Border Recovery Meinke / Syngenta (2 alleles) Database Release March, 2002 Predicted Sequences Gene: 2807 nucleotides mRNA: 2807 nucleotides Protein:   896 amino acids cDNA Status FLcDNA Available: AK117204 Top BLAST Hits Arabidopsis: AT5G16860.1 (31%) Plant ESTs: Rice (Oryza sativa) (44%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 250893_at

Mutant Information Allele Symbol emb 1899-1 emb 1899-2 emb 175-1 emb 175-2 Mutant Class Embryo Defective Embryo Defective Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Meinke / Syngenta Vernon / Feldmann Meinke / Feldmann Mutant Line Number 43951 73984 6679 5766b / emb 166 Ecotype Columbia Columbia Wassilewskija Wassilewskija Genetic Background   qrt     ABRC Stock CS16038 CS16039     Mutagen Treatment T-DNA T-DNA T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Yes   Details Flanking Sequence Details  (Help) Details     Location of Mutation Exon 1 Exon 1     Terminal Phenotype Globular  Details Globular  Details Globular Globular Nomarski Phenotype   Images   Images Allelism Evidence Reference Allele Complementation Test; Sequence Identity Complementation Test; Sequence Identity Complementation Test; Sequence Identity Database Release March, 2002 March, 2002 December, 2010 December, 2010 Seed Color White White     Embryo Color White White     Percent Mutant Seeds 25.2 % 25.6 %     Chi - Square <0.1 0.2     Seeds Counted 947 1200     Percent Top Half 54.4 % 48.9 %     Chi - Square 1.8 0.2     Average Seed Length 430 ± 60 µm 490 ± 40 µm     Average Embryo Length 80 ± 40 µm 70 ± 20 µm