Aug 17, 2018 4:33 PM
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SeedGenes Profile: EMB 1989
Gene Information
Gene Symbol
EMB 1989
Chromosome Locus
At4g21710
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
NRPB 2
(C. Pikaard) Sequence Identity
Gene Class
Embryo Defective
Predicted Function
RNA Polymerase II Subunit
Function Details
Transcription
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2003
Predicted Sequences
Gene:
6744 nucleotides
mRNA:
3794 nucleotides
Protein:
1188 amino acids
cDNA Status
FLcDNA Available:
Z19120
Top BLAST Hits
Arabidopsis
:
AT5G45140.1 (36%)
Plant ESTs:
Tomato (Lycopersicon esculentum) (94%)
Model Genomes:
Homo sapiens (67%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
254368_at
Mutant Information
Allele Symbol
emb 1989-1
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
47489
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16201
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Upstream to Intron 1
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
September, 2003
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
20.3 %
Chi - Square
10.4
Seeds Counted
869
Percent Top Half
44.3 %
Chi - Square
2.3
Average Seed Length
520 ± 70 µm
Average Embryo Length
20 ± 10 µm