OSU Syngenta vbi

SeedGenes Profile: EMB 2167

Gene Information
Gene Symbol EMB 2167
Chromosome Locus At3g52590   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol HAP 4 (M. Johnson) Alternate Name
Gene Class Embryo Defective
Predicted Function Ubiquitin Fused to Ribosomal Protein L40 (UbA52)
Function Details Ubiquitin ribosomal fusion protein
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:1304 nucleotides
mRNA: 677 nucleotides
Protein:  128 amino acids
cDNA Status FLcDNA Available: AY085820
Top BLAST Hits
Arabidopsis: AT2G36170.1 (100%)
Plant ESTs: Spruce (99%)
Model Genomes:  Homo sapiens (92%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 252056_at
Mutant Information
Allele Symbol emb 2167-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 68089
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16168
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation 5' UTR
Terminal Phenotype Transition  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release March, 2003
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 24.4 %
Chi - Square 0.1
Seeds Counted 435
Percent Top Half 50.9 %
Chi - Square <0.1
Average Seed Length 470 ± 50 µm
Average Embryo Length 110 ± 50 µm