OSU Syngenta vbi

SeedGenes Profile: EMB 2167

Gene Information
Gene Symbol EMB 2167
Chromosome Locus At3g52590   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol HAP 4 (M. Johnson) Alternate Name
Gene Class Embryo Defective
Predicted Function Ubiquitin Fused to Ribosomal Protein L40 (UbA52)
Function Details Ubiquitin ribosomal fusion protein
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:1304 nucleotides
mRNA: 677 nucleotides
Protein:  128 amino acids
cDNA Status FLcDNA Available: AY085820
Top BLAST Hits
Arabidopsis: AT2G36170.1 (100%)
Plant ESTs: Spruce (99%)
Model Genomes:  Homo sapiens (92%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 252056_at
Mutant Information
Allele Symbol emb 2167-3
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 61713
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16210
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 4 to Exon 5
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2003
Seed Color White
Embryo Color White
Percent Mutant Seeds 11.3 %
Chi - Square 87.6
Seeds Counted 870
Percent Top Half 58.2 %
Chi - Square 2.6
Average Seed Length 430 ± 60 µm
Average Embryo Length 50 ± 40 µm