Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2394
Gene Information
Gene Symbol
EMB 2394
Chromosome Locus
At1g05190
Alleles in Database
2
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Chloroplast 50S Ribosomal Protein L6
Function Details
Translation in chloroplast
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Myouga / Riken (1 allele)
Database Release
March, 2003
Predicted Sequences
Gene:
1487 nucleotides
mRNA:
935 nucleotides
Protein:
223 amino acids
cDNA Status
FLcDNA Available:
AY085715
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (94%)
Model Genomes:
Synechocystis (50%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
264575_at
Mutant Information
Allele Symbol
emb 2394-1
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
82754
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16176
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 1
Terminal Phenotype
Globular
Details
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2003
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
24.8 %
Chi - Square
<0.1
Seeds Counted
1179
Percent Top Half
48.6 %
Chi - Square
0.2
Average Seed Length
480 ± 50 µm
Average Embryo Length
120 ± 60 µm