OSU Syngenta vbi

SeedGenes Profile: EMB 2411

Gene Information
Gene Symbol EMB 2411
Chromosome Locus At1g08840   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Helicase/Nuclease (Dna2)
Function Details DNA replication; Okazaki fragment metabolism
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release March, 2003
Predicted Sequences
Gene:8791 nucleotides
mRNA: 3891 nucleotides
Protein:  1296 amino acids
cDNA Status Unknown
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (54%)
Model Genomes:  Neurospora crassa (34%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 264801_at
Mutant Information
Allele Symbol emb 2411-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 110058
Ecotype Columbia
Genetic Background  
ABRC Stock CS24053
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 10 to Intron 10
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release March, 2004
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 27.1 %
Chi - Square 2.1
Seeds Counted 863
Percent Top Half 50.4 %
Chi - Square <0.1
Average Seed Length 530 ± 60 µm
Average Embryo Length 30 ± 20 µm