Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2728
Gene Information
Gene Symbol
EMB 2728
Chromosome Locus
At5g61410
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
RPE
(P. Abad) Alternate Name
Gene Class
Embryo Defective
Predicted Function
Ribulose-5-Phosphate-3-Epimerase
Function Details
Role in Calvin cycle and oxidative pentose phosphate pathway
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
2500 nucleotides
mRNA:
1408 nucleotides
Protein:
281 amino acids
cDNA Status
FLcDNA Available:
AY045855
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (92%)
Model Genomes:
Synechocystis (68%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
247523_at
Mutant Information
Allele Symbol
emb 2728-2
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
69756
Ecotype
Columbia
Genetic Background
qrt
ABRC Stock
CS16136
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
5' UTR to Intron 1
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
September, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
25.3 %
Chi - Square
<0.1
Seeds Counted
1137
Percent Top Half
52.1 %
Chi - Square
0.5
Average Seed Length
490 ± 40 µm
Average Embryo Length
330 ± 80 µm