SeedGenes Profile: EMB 2728

Gene Information Gene Symbol EMB 2728 Chromosome Locus At5g61410   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol RPE (P. Abad) Alternate Name Gene Class Embryo Defective Predicted Function Ribulose-5-Phosphate-3-Epimerase Function Details Role in Calvin cycle and oxidative pentose phosphate pathway Gene Evidence Single Border Recovery Meinke / Syngenta (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Database Release September, 2002 Predicted Sequences Gene: 2500 nucleotides mRNA: 1408 nucleotides Protein:   281 amino acids cDNA Status FLcDNA Available: AY045855 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (92%) Model Genomes:   Synechocystis (68%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 247523_at

Mutant Information Allele Symbol emb 2728-1 emb 2728-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Meinke / Syngenta Mutant Line Number 49903 69756 Ecotype Columbia Columbia Genetic Background   qrt ABRC Stock   CS16136 Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help) Details Location of Mutation Upstream 5' UTR to Intron 1 Terminal Phenotype Not Available Cotyledon  Details Nomarski Phenotype   Images Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release September, 2002 September, 2002 Seed Color   Pale Yellow Embryo Color   Pale Yellow Percent Mutant Seeds   25.3 % Chi - Square   <0.1 Seeds Counted   1137 Percent Top Half   52.1 % Chi - Square   0.5 Average Seed Length   490 ± 40 µm Average Embryo Length   330 ± 80 µm